Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC9.64□□□□□ -0.87
HSPG2P98160 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC9.64□□□□□ -0.87
HSPG2P98160 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
HSPG2P98160 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 AL357563.1-201ENST00000404728 395 ntBASIC9.64□□□□□ -0.87
HSPG2P98160 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC9.64□□□□□ -0.87
HSPG2P98160 FAM86KP-201ENST00000509817 987 ntBASIC9.64□□□□□ -0.87
HSPG2P98160 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC9.64□□□□□ -0.87
HSPG2P98160 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
HSPG2P98160 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
HSPG2P98160 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.64□□□□□ -0.87
HSPG2P98160 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC9.64□□□□□ -0.87
HSPG2P98160 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC9.64□□□□□ -0.87
HSPG2P98160 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC9.64□□□□□ -0.87
HSPG2P98160 AC132938.4-201ENST00000623835 848 ntBASIC9.64□□□□□ -0.87
HSPG2P98160 AC005618.3-201ENST00000624928 458 ntBASIC9.64□□□□□ -0.87
HSPG2P98160 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
HSPG2P98160 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
HSPG2P98160 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 RPS15-201ENST00000233609 534 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 DNM1P51-201ENST00000558149 522 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 RPS15-205ENST00000586686 562 ntTSL 5 BASIC9.63□□□□□ -0.87
HSPG2P98160 RPS15-208ENST00000591804 711 ntTSL 5 BASIC9.63□□□□□ -0.87
HSPG2P98160 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 ZACNP1-201ENST00000612259 710 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 AL023803.2-201ENST00000620080 638 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 GGT3P-204ENST00000453783 1664 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 BX323043.1-201ENST00000641006 1765 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC9.63□□□□□ -0.87
HSPG2P98160 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 AL031713.1-201ENST00000564813 661 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 FTLP5-201ENST00000586853 534 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC9.63□□□□□ -0.87
HSPG2P98160 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
HSPG2P98160 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
HSPG2P98160 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC9.63□□□□□ -0.87
HSPG2P98160 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC9.63□□□□□ -0.87
HSPG2P98160 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC9.63□□□□□ -0.87
HSPG2P98160 AC242376.2-201ENST00000619355 883 ntBASIC9.63□□□□□ -0.87
HSPG2P98160 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
HSPG2P98160 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC9.63□□□□□ -0.87
HSPG2P98160 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms