Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.17■□□□□ 0.02
RAE1P78406 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.17■□□□□ 0.02
RAE1P78406 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAE1P78406 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAE1P78406 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 DBET-201ENST00000630918 3363 ntBASIC15.16■□□□□ 0.02
RAE1P78406 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 RBPMS2P1-201ENST00000437762 623 ntBASIC15.16■□□□□ 0.02
RAE1P78406 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 AC105021.1-202ENST00000570572 669 ntBASIC15.16■□□□□ 0.02
RAE1P78406 MIR3687-2-201ENST00000577708 61 ntBASIC15.16■□□□□ 0.02
RAE1P78406 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 MIR3687-1-201ENST00000614492 61 ntBASIC15.16■□□□□ 0.02
RAE1P78406 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RAE1P78406 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.16■□□□□ 0.02
RAE1P78406 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.16■□□□□ 0.02
RAE1P78406 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RAE1P78406 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
RAE1P78406 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 AC112693.3-201ENST00000624819 1983 ntBASIC15.15■□□□□ 0.02
RAE1P78406 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 AZGP1P1-201ENST00000411909 902 ntBASIC15.15■□□□□ 0.02
RAE1P78406 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.15■□□□□ 0.02
RAE1P78406 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.15■□□□□ 0.02
RAE1P78406 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.15■□□□□ 0.02
RAE1P78406 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 AC026150.2-201ENST00000564693 1156 ntBASIC15.15■□□□□ 0.02
RAE1P78406 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RAE1P78406 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 AC127383.1-201ENST00000444697 1800 ntBASIC15.15■□□□□ 0.02
RAE1P78406 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.15■□□□□ 0.02
RAE1P78406 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RAE1P78406 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RAE1P78406 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAE1P78406 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RAE1P78406 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms