Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
HIST1H3AP68431 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 KRT8P37-201ENST00000451609 1420 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H3AP68431 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 AC020658.6-201ENST00000623564 1870 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H3AP68431 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 KRT18P32-201ENST00000424695 1287 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14□□□□□ -0.17
HIST1H3AP68431 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14□□□□□ -0.17
HIST1H3AP68431 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14□□□□□ -0.17
HIST1H3AP68431 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 BANF1P1-201ENST00000553684 263 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 AC004835.2-201ENST00000603762 682 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14□□□□□ -0.17
HIST1H3AP68431 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14□□□□□ -0.17
HIST1H3AP68431 AC132872.4-202ENST00000622924 2756 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 AC022532.1-201ENST00000624563 1728 ntBASIC14□□□□□ -0.17
HIST1H3AP68431 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
HIST1H3AP68431 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 MIR4313-201ENST00000580760 101 ntBASIC13.99□□□□□ -0.17
HIST1H3AP68431 AC018529.1-201ENST00000613063 361 ntBASIC13.99□□□□□ -0.17
HIST1H3AP68431 AC009093.7-201ENST00000623853 1223 ntBASIC13.99□□□□□ -0.17
HIST1H3AP68431 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.99□□□□□ -0.17
HIST1H3AP68431 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HIST1H3AP68431 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HIST1H3AP68431 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.98□□□□□ -0.17
HIST1H3AP68431 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms