Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
RAB5BP61020 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5BP61020 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5BP61020 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC12.55□□□□□ -0.4
RAB5BP61020 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC12.55□□□□□ -0.4
RAB5BP61020 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.55□□□□□ -0.4
RAB5BP61020 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 AC105036.2-201ENST00000569468 176 ntBASIC12.55□□□□□ -0.4
RAB5BP61020 SOX15-203ENST00000570788 1093 ntBASIC12.55□□□□□ -0.4
RAB5BP61020 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
RAB5BP61020 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.55□□□□□ -0.4
RAB5BP61020 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.55□□□□□ -0.4
RAB5BP61020 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
RAB5BP61020 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
RAB5BP61020 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 MST1P2-201ENST00000457982 2291 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RAB5BP61020 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.54□□□□□ -0.4
RAB5BP61020 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.54□□□□□ -0.4
RAB5BP61020 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
RAB5BP61020 FAM207BP-201ENST00000447172 505 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 UNC93B4-201ENST00000505679 747 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
RAB5BP61020 AC091874.3-201ENST00000512672 1195 ntBASIC12.54□□□□□ -0.4
RAB5BP61020 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms