Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.89■□□□□ 0.93
RIPK4P57078 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC20.89■□□□□ 0.93
RIPK4P57078 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RIPK4P57078 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.89■□□□□ 0.93
RIPK4P57078 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK4P57078 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC20.89■□□□□ 0.93
RIPK4P57078 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.88■□□□□ 0.93
RIPK4P57078 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.88■□□□□ 0.93
RIPK4P57078 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.88■□□□□ 0.93
RIPK4P57078 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.88■□□□□ 0.93
RIPK4P57078 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
RIPK4P57078 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.88■□□□□ 0.93
RIPK4P57078 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
RIPK4P57078 SRD5A3P1-201ENST00000603021 949 ntBASIC20.88■□□□□ 0.93
RIPK4P57078 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.88■□□□□ 0.93
RIPK4P57078 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.88■□□□□ 0.93
RIPK4P57078 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RIPK4P57078 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.88■□□□□ 0.93
RIPK4P57078 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK4P57078 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RIPK4P57078 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RIPK4P57078 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.87■□□□□ 0.93
RIPK4P57078 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC20.87■□□□□ 0.93
RIPK4P57078 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.87■□□□□ 0.93
RIPK4P57078 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.87■□□□□ 0.93
RIPK4P57078 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 GOLGA6L11P-201ENST00000417252 1298 ntBASIC20.87■□□□□ 0.93
RIPK4P57078 AC136604.1-201ENST00000418535 575 ntBASIC20.87■□□□□ 0.93
RIPK4P57078 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
RIPK4P57078 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.87■□□□□ 0.93
RIPK4P57078 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.87■□□□□ 0.93
RIPK4P57078 TERF1P3-201ENST00000505638 1227 ntBASIC20.87■□□□□ 0.93
RIPK4P57078 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.87■□□□□ 0.93
RIPK4P57078 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.87■□□□□ 0.93
RIPK4P57078 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RIPK4P57078 AF228730.6-201ENST00000641497 218 ntBASIC20.87■□□□□ 0.93
RIPK4P57078 AC084121.3-201ENST00000641716 218 ntBASIC20.87■□□□□ 0.93
RIPK4P57078 AL607033.1-201ENST00000623900 1599 ntBASIC20.87■□□□□ 0.93
RIPK4P57078 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.87■□□□□ 0.93
RIPK4P57078 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RIPK4P57078 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK4P57078 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.86■□□□□ 0.93
RIPK4P57078 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK4P57078 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK4P57078 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.86■□□□□ 0.93
RIPK4P57078 MIR4313-201ENST00000580760 101 ntBASIC20.86■□□□□ 0.93
RIPK4P57078 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RIPK4P57078 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms