Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN6P56747 FO393414.2-201ENST00000405153 598 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN6P56747 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN6P56747 KRT18P64-201ENST00000434946 1219 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 FAM86LP-201ENST00000478302 853 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 AP001889.1-201ENST00000525414 633 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN6P56747 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN6P56747 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN6P56747 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN6P56747 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN6P56747 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN6P56747 MIR3615-201ENST00000581999 87 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN6P56747 AC244669.2-201ENST00000612320 853 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 TUBB1P2-201ENST00000422712 1306 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 TUBB1P1-201ENST00000503144 1300 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN6P56747 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 Z97205.2-201ENST00000564697 1639 ntBASIC15.32■□□□□ 0.04
CLDN6P56747 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN6P56747 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
CLDN6P56747 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 GOLGA2P4-201ENST00000441462 777 ntBASIC15.31■□□□□ 0.04
CLDN6P56747 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN6P56747 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.31■□□□□ 0.04
CLDN6P56747 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN6P56747 MIR4321-201ENST00000592276 80 ntBASIC15.31■□□□□ 0.04
CLDN6P56747 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.31■□□□□ 0.04
CLDN6P56747 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLDN6P56747 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN6P56747 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN6P56747 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN6P56747 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CLDN6P56747 AC011676.5-201ENST00000624864 2660 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN6P56747 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN6P56747 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 AC004945.1-201ENST00000416738 983 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN6P56747 FAM21FP-201ENST00000426241 1131 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 AL442647.2-201ENST00000429864 857 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN6P56747 RPL13P2-201ENST00000440687 659 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 RPL7P3-201ENST00000441388 714 ntBASIC15.3■□□□□ 0.04
CLDN6P56747 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN6P56747 FTH1P14-201ENST00000482930 551 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms