Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CDH11P55287 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH11P55287 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDH11P55287 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH11P55287 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CDH11P55287 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 HTR5BP-201ENST00000430851 1154 ntBASIC14.75□□□□□ -0.05
CDH11P55287 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH11P55287 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH11P55287 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH11P55287 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH11P55287 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 AL596442.2-201ENST00000610240 980 ntBASIC14.75□□□□□ -0.05
CDH11P55287 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
CDH11P55287 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDH11P55287 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH11P55287 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH11P55287 AC025580.3-201ENST00000617932 1424 ntBASIC14.75□□□□□ -0.05
CDH11P55287 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 AC092919.2-201ENST00000623631 1645 ntBASIC14.74□□□□□ -0.05
CDH11P55287 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH11P55287 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 RHOQP3-201ENST00000437982 621 ntBASIC14.74□□□□□ -0.05
CDH11P55287 AP006288.1-201ENST00000446065 395 ntBASIC14.74□□□□□ -0.05
CDH11P55287 DNAJB3-202ENST00000449667 1266 ntBASIC14.74□□□□□ -0.05
CDH11P55287 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH11P55287 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.74□□□□□ -0.05
CDH11P55287 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH11P55287 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.74□□□□□ -0.05
CDH11P55287 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH11P55287 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH11P55287 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms