Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AL161645.1-201ENST00000622716 1255 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 AC092902.6-201ENST00000641783 218 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 AL359258.3-201ENST00000622910 2331 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.58■□□□□ 0.08
CLCN2P51788 AC020658.6-201ENST00000623564 1870 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCN2P51788 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.58■□□□□ 0.08
CLCN2P51788 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCN2P51788 AL031731.1-201ENST00000642131 2094 ntBASIC15.58■□□□□ 0.08
CLCN2P51788 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN2P51788 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLCN2P51788 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN2P51788 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCN2P51788 AP006288.1-201ENST00000446065 395 ntBASIC15.57■□□□□ 0.08
CLCN2P51788 SNHG9-202ENST00000564014 471 ntBASIC15.57■□□□□ 0.08
CLCN2P51788 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCN2P51788 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 MIR3909-201ENST00000579518 119 ntBASIC15.57■□□□□ 0.08
CLCN2P51788 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN2P51788 AL009183.1-201ENST00000603760 355 ntBASIC15.57■□□□□ 0.08
CLCN2P51788 AL031055.1-201ENST00000606362 631 ntBASIC15.57■□□□□ 0.08
CLCN2P51788 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLCN2P51788 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCN2P51788 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCN2P51788 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 CICP24-201ENST00000605464 2705 ntBASIC15.57■□□□□ 0.08
CLCN2P51788 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCN2P51788 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCN2P51788 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLCN2P51788 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 AC007191.1-201ENST00000623179 2995 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CLCN2P51788 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 RNU1-129P-201ENST00000384064 167 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 PMS2P4-201ENST00000412466 1052 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.56■□□□□ 0.08
CLCN2P51788 AC254562.1-201ENST00000417586 456 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN2P51788 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.56■□□□□ 0.08
CLCN2P51788 FAM86C2P-203ENST00000528684 1004 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 AC109635.5-201ENST00000533593 962 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.56■□□□□ 0.08
CLCN2P51788 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CLCN2P51788 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.56■□□□□ 0.08
CLCN2P51788 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 U1.21-201ENST00000580816 167 ntBASIC15.56■□□□□ 0.08
CLCN2P51788 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.56■□□□□ 0.08
CLCN2P51788 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCN2P51788 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCN2P51788 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms