Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.64■□□□□ 0.41
GPC3P51654 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.64■□□□□ 0.41
GPC3P51654 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.64■□□□□ 0.41
GPC3P51654 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GPC3P51654 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.64■□□□□ 0.41
GPC3P51654 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GPC3P51654 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GPC3P51654 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 PCDHA1-201ENST00000378133 2726 ntBASIC17.63■□□□□ 0.41
GPC3P51654 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC3P51654 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
GPC3P51654 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC3P51654 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC3P51654 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 CR383656.12-201ENST00000549567 513 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AC023310.3-201ENST00000557027 670 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AC100756.1-201ENST00000562736 682 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AC138749.3-201ENST00000567691 622 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AC092337.1-201ENST00000568699 1129 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 CHCHD2P3-201ENST00000603038 451 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AC116165.1-201ENST00000611806 668 ntBASIC17.63■□□□□ 0.41
GPC3P51654 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.63■□□□□ 0.41
GPC3P51654 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
GPC3P51654 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.63■□□□□ 0.41
GPC3P51654 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 SLC7A15P-201ENST00000424028 1363 ntBASIC17.63■□□□□ 0.41
GPC3P51654 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 KRT8P37-201ENST00000451609 1420 ntBASIC17.63■□□□□ 0.41
GPC3P51654 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
GPC3P51654 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
GPC3P51654 BNIP3P1-202ENST00000550043 1585 ntBASIC17.62■□□□□ 0.41
GPC3P51654 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GPC3P51654 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GPC3P51654 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GPC3P51654 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC3P51654 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC3P51654 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 AC087499.6-201ENST00000411576 835 ntBASIC17.62■□□□□ 0.41
GPC3P51654 AZGP1P1-201ENST00000411909 902 ntBASIC17.62■□□□□ 0.41
GPC3P51654 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.62■□□□□ 0.41
GPC3P51654 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.62■□□□□ 0.41
GPC3P51654 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 TPRX2P-201ENST00000535362 881 ntBASIC17.62■□□□□ 0.41
GPC3P51654 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
GPC3P51654 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.62■□□□□ 0.41
GPC3P51654 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.62■□□□□ 0.41
GPC3P51654 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.62■□□□□ 0.41
GPC3P51654 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC3P51654 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GPC3P51654 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.62■□□□□ 0.41
GPC3P51654 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms