Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BRCC3P46736 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
BRCC3P46736 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
BRCC3P46736 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
BRCC3P46736 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.96■□□□□ 0.3
BRCC3P46736 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
BRCC3P46736 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
BRCC3P46736 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCC3P46736 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
BRCC3P46736 AL607033.1-201ENST00000623900 1599 ntBASIC16.95■□□□□ 0.3
BRCC3P46736 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
BRCC3P46736 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCC3P46736 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCC3P46736 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
BRCC3P46736 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCC3P46736 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCC3P46736 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCC3P46736 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCC3P46736 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCC3P46736 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 AC104596.2-201ENST00000512793 793 ntBASIC16.95■□□□□ 0.3
BRCC3P46736 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.95■□□□□ 0.3
BRCC3P46736 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCC3P46736 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCC3P46736 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.95■□□□□ 0.3
BRCC3P46736 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.95■□□□□ 0.3
BRCC3P46736 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 AC097359.3-201ENST00000603982 1210 ntBASIC16.95■□□□□ 0.3
BRCC3P46736 TMEM261P1-201ENST00000604899 340 ntBASIC16.95■□□□□ 0.3
BRCC3P46736 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.95■□□□□ 0.3
BRCC3P46736 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
BRCC3P46736 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
BRCC3P46736 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
BRCC3P46736 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
BRCC3P46736 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
BRCC3P46736 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 AC136604.1-201ENST00000418535 575 ntBASIC16.94■□□□□ 0.3
BRCC3P46736 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
BRCC3P46736 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.94■□□□□ 0.3
BRCC3P46736 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.94■□□□□ 0.3
BRCC3P46736 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
BRCC3P46736 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
BRCC3P46736 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
BRCC3P46736 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.93■□□□□ 0.3
BRCC3P46736 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.93■□□□□ 0.3
BRCC3P46736 AC092552.1-201ENST00000547243 906 ntBASIC16.93■□□□□ 0.3
BRCC3P46736 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.93■□□□□ 0.3
BRCC3P46736 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms