Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.59■□□□□ 0.41
HTTP42858 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.59■□□□□ 0.41
HTTP42858 AC007663.3-201ENST00000609632 465 ntBASIC17.59■□□□□ 0.41
HTTP42858 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
HTTP42858 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.59■□□□□ 0.41
HTTP42858 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.59■□□□□ 0.41
HTTP42858 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HTTP42858 AC026316.1-201ENST00000398900 414 ntBASIC17.58■□□□□ 0.41
HTTP42858 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.58■□□□□ 0.41
HTTP42858 AC012618.1-201ENST00000461223 412 ntBASIC17.58■□□□□ 0.41
HTTP42858 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC17.58■□□□□ 0.41
HTTP42858 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HTTP42858 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.58■□□□□ 0.41
HTTP42858 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTTP42858 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HTTP42858 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTTP42858 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HTTP42858 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HTTP42858 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HTTP42858 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HTTP42858 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.58■□□□□ 0.41
HTTP42858 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.58■□□□□ 0.41
HTTP42858 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HTTP42858 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 FGFR3P1-201ENST00000449999 601 ntBASIC17.58■□□□□ 0.4
HTTP42858 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.58■□□□□ 0.4
HTTP42858 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HTTP42858 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.58■□□□□ 0.4
HTTP42858 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HTTP42858 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 AP001094.4-201ENST00000579008 2176 ntBASIC17.58■□□□□ 0.4
HTTP42858 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 PDIA3P2-201ENST00000428073 158 ntBASIC17.58■□□□□ 0.4
HTTP42858 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.58■□□□□ 0.4
HTTP42858 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.58■□□□□ 0.4
HTTP42858 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.58■□□□□ 0.4
HTTP42858 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.58■□□□□ 0.4
HTTP42858 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.58■□□□□ 0.4
HTTP42858 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HTTP42858 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.58■□□□□ 0.4
HTTP42858 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.57■□□□□ 0.4
HTTP42858 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.57■□□□□ 0.4
HTTP42858 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.57■□□□□ 0.4
HTTP42858 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.57■□□□□ 0.4
HTTP42858 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.57■□□□□ 0.4
HTTP42858 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.57■□□□□ 0.4
HTTP42858 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.57■□□□□ 0.4
HTTP42858 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HTTP42858 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.57■□□□□ 0.4
HTTP42858 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.57■□□□□ 0.4
HTTP42858 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.57■□□□□ 0.4
HTTP42858 AC132938.4-201ENST00000623835 848 ntBASIC17.57■□□□□ 0.4
HTTP42858 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HTTP42858 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HTTP42858 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.57■□□□□ 0.4
HTTP42858 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HTTP42858 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HTTP42858 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.56■□□□□ 0.4
HTTP42858 AP001065.2-201ENST00000617205 644 ntBASIC17.56■□□□□ 0.4
HTTP42858 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HTTP42858 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
HTTP42858 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.56■□□□□ 0.4
HTTP42858 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HTTP42858 AC105020.1-201ENST00000435356 2205 ntBASIC17.56■□□□□ 0.4
HTTP42858 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HTTP42858 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms