Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 REXO1L1P-202ENST00000608646 1974 ntBASIC20.06■□□□□ 0.8
COL15A1P39059 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 AC026954.1-201ENST00000429771 1293 ntBASIC20.06■□□□□ 0.8
COL15A1P39059 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
COL15A1P39059 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 AL450472.2-201ENST00000603663 1156 ntBASIC20.06■□□□□ 0.8
COL15A1P39059 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.06■□□□□ 0.8
COL15A1P39059 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
COL15A1P39059 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL15A1P39059 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.05■□□□□ 0.8
COL15A1P39059 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
COL15A1P39059 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
COL15A1P39059 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.05■□□□□ 0.8
COL15A1P39059 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL15A1P39059 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL15A1P39059 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL15A1P39059 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.05■□□□□ 0.8
COL15A1P39059 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.05■□□□□ 0.8
COL15A1P39059 AL121723.1-201ENST00000445194 1519 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC20.05■□□□□ 0.8
COL15A1P39059 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 AC016694.1-201ENST00000434179 700 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 AC093433.1-201ENST00000458048 571 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
COL15A1P39059 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC20.05■□□□□ 0.8
COL15A1P39059 KRT18P43-201ENST00000469825 1281 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 AC010328.2-201ENST00000597698 1111 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 RHOXF1P1-202ENST00000635473 501 ntBASIC20.05■□□□□ 0.8
COL15A1P39059 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL15A1P39059 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COL15A1P39059 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
COL15A1P39059 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC20.04■□□□□ 0.8
COL15A1P39059 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
COL15A1P39059 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 ZNF767P-206ENST00000513792 565 ntBASIC20.04■□□□□ 0.8
COL15A1P39059 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 AC243960.2-201ENST00000600996 747 ntBASIC20.04■□□□□ 0.8
COL15A1P39059 AC097359.3-201ENST00000603982 1210 ntBASIC20.04■□□□□ 0.8
COL15A1P39059 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.04■□□□□ 0.8
COL15A1P39059 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
COL15A1P39059 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL15A1P39059 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL15A1P39059 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.03■□□□□ 0.8
COL15A1P39059 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.03■□□□□ 0.8
COL15A1P39059 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL15A1P39059 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.03■□□□□ 0.8
COL15A1P39059 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms