Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
LSP1P33241 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LSP1P33241 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 BX640514.1-201ENST00000583223 1918 ntBASIC16.13■□□□□ 0.17
LSP1P33241 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.13■□□□□ 0.17
LSP1P33241 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LSP1P33241 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
LSP1P33241 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
LSP1P33241 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.13■□□□□ 0.17
LSP1P33241 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.13■□□□□ 0.17
LSP1P33241 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.13■□□□□ 0.17
LSP1P33241 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.13■□□□□ 0.17
LSP1P33241 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.13■□□□□ 0.17
LSP1P33241 RN7SL850P-201ENST00000579959 291 ntBASIC16.13■□□□□ 0.17
LSP1P33241 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.13■□□□□ 0.17
LSP1P33241 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LSP1P33241 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LSP1P33241 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LSP1P33241 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 INTS4P1-201ENST00000438455 1935 ntBASIC16.12■□□□□ 0.17
LSP1P33241 ZBED1P1-201ENST00000502364 1930 ntBASIC16.12■□□□□ 0.17
LSP1P33241 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 ARMC10P1-201ENST00000313754 855 ntBASIC16.12■□□□□ 0.17
LSP1P33241 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 RCN1P1-201ENST00000400413 996 ntBASIC16.12■□□□□ 0.17
LSP1P33241 AK4P3-201ENST00000418260 669 ntBASIC16.12■□□□□ 0.17
LSP1P33241 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.12■□□□□ 0.17
LSP1P33241 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.12■□□□□ 0.17
LSP1P33241 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 AC023024.2-201ENST00000623561 1993 ntBASIC16.12■□□□□ 0.17
LSP1P33241 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 AL365209.1-201ENST00000624418 6473 ntBASIC16.12■□□□□ 0.17
LSP1P33241 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.12■□□□□ 0.17
LSP1P33241 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LSP1P33241 AL359183.1-201ENST00000623796 2132 ntBASIC16.12■□□□□ 0.17
LSP1P33241 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LSP1P33241 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
LSP1P33241 HSPA7-201ENST00000445535 1927 ntBASIC16.11■□□□□ 0.17
LSP1P33241 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.11■□□□□ 0.17
LSP1P33241 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LSP1P33241 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LSP1P33241 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms