Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HOXC8P31273 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 AC124067.4-201ENST00000519691 2379 ntBASIC17.22■□□□□ 0.35
HOXC8P31273 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HOXC8P31273 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXC8P31273 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXC8P31273 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
HOXC8P31273 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HOXC8P31273 AL138799.1-201ENST00000448213 1675 ntBASIC17.21■□□□□ 0.35
HOXC8P31273 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HOXC8P31273 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.21■□□□□ 0.35
HOXC8P31273 AC006001.1-201ENST00000325130 474 ntBASIC17.21■□□□□ 0.35
HOXC8P31273 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
HOXC8P31273 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC8P31273 YBX1P6-201ENST00000442962 1002 ntBASIC17.21■□□□□ 0.35
HOXC8P31273 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC8P31273 AC108725.1-201ENST00000495472 409 ntBASIC17.21■□□□□ 0.35
HOXC8P31273 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC8P31273 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.21■□□□□ 0.35
HOXC8P31273 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.21■□□□□ 0.35
HOXC8P31273 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HOXC8P31273 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.21■□□□□ 0.35
HOXC8P31273 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HOXC8P31273 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HOXC8P31273 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.21■□□□□ 0.34
HOXC8P31273 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
HOXC8P31273 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC8P31273 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HOXC8P31273 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HOXC8P31273 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 AC020907.1-201ENST00000616460 1350 ntBASIC17.2■□□□□ 0.34
HOXC8P31273 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXC8P31273 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.2■□□□□ 0.34
HOXC8P31273 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 AP001582.1-201ENST00000525856 295 ntBASIC17.2■□□□□ 0.34
HOXC8P31273 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HOXC8P31273 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.2■□□□□ 0.34
HOXC8P31273 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 PCDHA12-202ENST00000613593 2588 ntBASIC17.2■□□□□ 0.34
HOXC8P31273 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HOXC8P31273 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HOXC8P31273 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC8P31273 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.19■□□□□ 0.34
HOXC8P31273 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.19■□□□□ 0.34
HOXC8P31273 C2orf27AP3-201ENST00000434123 579 ntBASIC17.19■□□□□ 0.34
HOXC8P31273 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HOXC8P31273 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.19■□□□□ 0.34
HOXC8P31273 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms