Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
CHMP24386 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CHMP24386 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.04■□□□□ -0
CHMP24386 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
CHMP24386 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.04■□□□□ -0
CHMP24386 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 AC004835.2-201ENST00000603762 682 ntBASIC15.04■□□□□ -0
CHMP24386 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.04■□□□□ -0
CHMP24386 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.04■□□□□ -0
CHMP24386 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.04■□□□□ -0
CHMP24386 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CHMP24386 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CHMP24386 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 TCAF2P1-201ENST00000291129 2421 ntBASIC15.04■□□□□ -0
CHMP24386 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CHMP24386 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CHMP24386 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.03■□□□□ -0
CHMP24386 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CHMP24386 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.03■□□□□ -0
CHMP24386 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHMP24386 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.03■□□□□ -0
CHMP24386 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.03■□□□□ -0
CHMP24386 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.03■□□□□ -0
CHMP24386 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 AL135744.1-201ENST00000565098 629 ntBASIC15.03■□□□□ -0
CHMP24386 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CHMP24386 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.03■□□□□ -0
CHMP24386 AC022145.2-201ENST00000598203 171 ntBASIC15.03■□□□□ -0
CHMP24386 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.03■□□□□ -0
CHMP24386 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CHMP24386 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.03■□□□□ -0
CHMP24386 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.03■□□□□ -0
CHMP24386 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CHMP24386 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CHMP24386 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.02■□□□□ -0
CHMP24386 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.02■□□□□ -0
CHMP24386 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 AC068587.6-202ENST00000641839 5619 ntBASIC15.02■□□□□ -0
CHMP24386 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.02■□□□□ -0
CHMP24386 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.02■□□□□ -0
CHMP24386 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.02■□□□□ -0
CHMP24386 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CHMP24386 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.02■□□□□ -0
CHMP24386 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CHMP24386 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.02■□□□□ -0
CHMP24386 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHMP24386 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms