Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 AL139400.1-201ENST00000366220 510 ntBASIC16.8■□□□□ 0.28
MMP8P22894 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 FO393414.2-201ENST00000405153 598 ntBASIC16.8■□□□□ 0.28
MMP8P22894 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 AC136604.1-201ENST00000418535 575 ntBASIC16.8■□□□□ 0.28
MMP8P22894 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.8■□□□□ 0.28
MMP8P22894 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MMP8P22894 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.8■□□□□ 0.28
MMP8P22894 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MMP8P22894 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MMP8P22894 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
MMP8P22894 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 KRT8P12-202ENST00000472924 1397 ntBASIC16.79■□□□□ 0.28
MMP8P22894 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP8P22894 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
MMP8P22894 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP8P22894 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP8P22894 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP8P22894 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 AC090616.6-203ENST00000579186 1945 ntBASIC16.79■□□□□ 0.28
MMP8P22894 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.79■□□□□ 0.28
MMP8P22894 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MMP8P22894 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 MTND6P24-201ENST00000440466 518 ntBASIC16.79■□□□□ 0.28
MMP8P22894 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.79■□□□□ 0.28
MMP8P22894 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.79■□□□□ 0.28
MMP8P22894 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP8P22894 AL691403.2-201ENST00000618460 490 ntBASIC16.79■□□□□ 0.28
MMP8P22894 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP8P22894 AC079781.4-201ENST00000641908 219 ntBASIC16.79■□□□□ 0.28
MMP8P22894 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.79■□□□□ 0.28
MMP8P22894 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 PPT1-215ENST00000641471 2368 ntBASIC16.79■□□□□ 0.28
MMP8P22894 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.79■□□□□ 0.28
MMP8P22894 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MMP8P22894 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.79■□□□□ 0.28
MMP8P22894 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
MMP8P22894 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP8P22894 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 AC073347.1-201ENST00000421633 2643 ntBASIC16.78■□□□□ 0.28
MMP8P22894 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
MMP8P22894 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MMP8P22894 TSEN15P1-201ENST00000423257 515 ntBASIC16.78■□□□□ 0.28
MMP8P22894 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.78■□□□□ 0.28
MMP8P22894 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms