Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ERCC2P18074 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ERCC2P18074 SPDYE17-201ENST00000412399 783 ntBASIC16.47■□□□□ 0.23
ERCC2P18074 CNN2P2-201ENST00000443536 909 ntBASIC16.47■□□□□ 0.23
ERCC2P18074 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 CNN2P3-201ENST00000450201 906 ntBASIC16.47■□□□□ 0.23
ERCC2P18074 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ERCC2P18074 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.47■□□□□ 0.23
ERCC2P18074 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC2P18074 AL136317.3-201ENST00000618497 906 ntBASIC16.47■□□□□ 0.23
ERCC2P18074 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.47■□□□□ 0.23
ERCC2P18074 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.47■□□□□ 0.23
ERCC2P18074 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ERCC2P18074 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ERCC2P18074 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ERCC2P18074 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
ERCC2P18074 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC2P18074 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ERCC2P18074 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC2P18074 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.46■□□□□ 0.23
ERCC2P18074 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC2P18074 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.46■□□□□ 0.23
ERCC2P18074 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.46■□□□□ 0.23
ERCC2P18074 AL079307.3-201ENST00000556114 283 ntBASIC16.46■□□□□ 0.23
ERCC2P18074 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC2P18074 AC015911.4-201ENST00000588022 1070 ntBASIC16.46■□□□□ 0.23
ERCC2P18074 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC2P18074 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ERCC2P18074 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.46■□□□□ 0.23
ERCC2P18074 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ERCC2P18074 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ERCC2P18074 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ERCC2P18074 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.46■□□□□ 0.23
ERCC2P18074 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
ERCC2P18074 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC2P18074 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
ERCC2P18074 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC2P18074 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
ERCC2P18074 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ERCC2P18074 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.46■□□□□ 0.22
ERCC2P18074 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC2P18074 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 AC105917.1-201ENST00000506637 2539 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
ERCC2P18074 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 AZGP1P1-201ENST00000411909 902 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 PHKG1P2-201ENST00000457537 863 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.45■□□□□ 0.22
ERCC2P18074 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC2P18074 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 AC051619.7-201ENST00000568314 623 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.45■□□□□ 0.22
ERCC2P18074 AL450472.2-201ENST00000603663 1156 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 AL589739.1-201ENST00000607720 493 ntBASIC16.45■□□□□ 0.22
ERCC2P18074 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ERCC2P18074 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.45■□□□□ 0.22
ERCC2P18074 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms