Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 AC092127.1-201ENST00000567093 3455 ntBASIC14.23□□□□□ -0.13
CTLA4P16410 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CTLA4P16410 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 RPS8P6-201ENST00000426177 609 ntBASIC14.23□□□□□ -0.13
CTLA4P16410 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.23□□□□□ -0.13
CTLA4P16410 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.23□□□□□ -0.13
CTLA4P16410 AC069335.1-201ENST00000489972 472 ntBASIC14.23□□□□□ -0.13
CTLA4P16410 SLC25A39P2-201ENST00000537614 270 ntBASIC14.23□□□□□ -0.13
CTLA4P16410 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.23□□□□□ -0.13
CTLA4P16410 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 UXT-AS1-201ENST00000590504 1525 ntBASIC14.23□□□□□ -0.13
CTLA4P16410 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CTLA4P16410 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CTLA4P16410 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.23□□□□□ -0.13
CTLA4P16410 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTLA4P16410 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 REXO1L1P-202ENST00000608646 1974 ntBASIC14.22□□□□□ -0.13
CTLA4P16410 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 AL592309.1-201ENST00000443127 649 ntBASIC14.22□□□□□ -0.13
CTLA4P16410 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.22□□□□□ -0.13
CTLA4P16410 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.22□□□□□ -0.13
CTLA4P16410 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.22□□□□□ -0.13
CTLA4P16410 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.22□□□□□ -0.13
CTLA4P16410 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.22□□□□□ -0.13
CTLA4P16410 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTLA4P16410 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
CTLA4P16410 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
CTLA4P16410 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CTLA4P16410 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms