Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CNN2P2-201ENST00000443536 909 ntBASIC16.82■□□□□ 0.28
PDGFRAP16234 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.82■□□□□ 0.28
PDGFRAP16234 CNN2P3-201ENST00000450201 906 ntBASIC16.82■□□□□ 0.28
PDGFRAP16234 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PDGFRAP16234 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 AC069262.1-201ENST00000539058 672 ntBASIC16.82■□□□□ 0.28
PDGFRAP16234 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 AC093512.1-201ENST00000617969 520 ntBASIC16.82■□□□□ 0.28
PDGFRAP16234 AL136317.3-201ENST00000618497 906 ntBASIC16.82■□□□□ 0.28
PDGFRAP16234 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDGFRAP16234 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDGFRAP16234 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.82■□□□□ 0.28
PDGFRAP16234 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 CYP4F24P-201ENST00000586049 1580 ntBASIC16.81■□□□□ 0.28
PDGFRAP16234 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFRAP16234 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFRAP16234 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFRAP16234 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFRAP16234 AC105021.1-202ENST00000570572 669 ntBASIC16.81■□□□□ 0.28
PDGFRAP16234 MIR4453-201ENST00000584019 89 ntBASIC16.81■□□□□ 0.28
PDGFRAP16234 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDGFRAP16234 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.81■□□□□ 0.28
PDGFRAP16234 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDGFRAP16234 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDGFRAP16234 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.81■□□□□ 0.28
PDGFRAP16234 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDGFRAP16234 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDGFRAP16234 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
PDGFRAP16234 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 SPDYE7P-202ENST00000420373 878 ntBASIC16.8■□□□□ 0.28
PDGFRAP16234 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFRAP16234 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.8■□□□□ 0.28
PDGFRAP16234 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.8■□□□□ 0.28
PDGFRAP16234 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.8■□□□□ 0.28
PDGFRAP16234 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.8■□□□□ 0.28
PDGFRAP16234 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDGFRAP16234 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDGFRAP16234 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms