Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IGHV3-43DP0DP04 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 AL355306.1-201ENST00000415580 579 ntBASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 KRT18P58-201ENST00000527480 1120 ntBASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 AC040169.1-201ENST00000565382 521 ntBASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 AC008677.1-201ENST00000519230 1561 ntBASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IGHV3-43DP0DP04 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 MIR574-201ENST00000385209 96 ntBASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 AC027307.2-201ENST00000591252 911 ntBASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 AC092902.6-201ENST00000641783 218 ntBASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
IGHV3-43DP0DP04 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms