Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SP9P0CG40 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SP9P0CG40 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.51■□□□□ 0.07
SP9P0CG40 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
SP9P0CG40 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.51■□□□□ 0.07
SP9P0CG40 AL645939.5-201ENST00000606834 243 ntBASIC15.51■□□□□ 0.07
SP9P0CG40 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.51■□□□□ 0.07
SP9P0CG40 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.51■□□□□ 0.07
SP9P0CG40 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
SP9P0CG40 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.51■□□□□ 0.07
SP9P0CG40 AC087289.5-201ENST00000586076 3175 ntBASIC15.51■□□□□ 0.07
SP9P0CG40 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SP9P0CG40 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
SP9P0CG40 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SP9P0CG40 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.5■□□□□ 0.07
SP9P0CG40 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.5■□□□□ 0.07
SP9P0CG40 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SP9P0CG40 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SP9P0CG40 AL133267.1-201ENST00000398220 340 ntBASIC15.5■□□□□ 0.07
SP9P0CG40 KLF2P2-201ENST00000416807 1039 ntBASIC15.5■□□□□ 0.07
SP9P0CG40 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.5■□□□□ 0.07
SP9P0CG40 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.5■□□□□ 0.07
SP9P0CG40 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.5■□□□□ 0.07
SP9P0CG40 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.5■□□□□ 0.07
SP9P0CG40 AC005740.2-201ENST00000511085 419 ntBASIC15.5■□□□□ 0.07
SP9P0CG40 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.5■□□□□ 0.07
SP9P0CG40 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.5■□□□□ 0.07
SP9P0CG40 AC100757.4-201ENST00000626934 759 ntBASIC15.5■□□□□ 0.07
SP9P0CG40 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.5■□□□□ 0.07
SP9P0CG40 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
SP9P0CG40 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SP9P0CG40 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.49■□□□□ 0.07
SP9P0CG40 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SP9P0CG40 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 AP001282.1-201ENST00000531301 1499 ntBASIC15.49■□□□□ 0.07
SP9P0CG40 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SP9P0CG40 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.49■□□□□ 0.07
SP9P0CG40 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 AC011742.3-201ENST00000439053 820 ntBASIC15.49■□□□□ 0.07
SP9P0CG40 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.49■□□□□ 0.07
SP9P0CG40 AC012618.1-201ENST00000461223 412 ntBASIC15.49■□□□□ 0.07
SP9P0CG40 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.49■□□□□ 0.07
SP9P0CG40 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.49■□□□□ 0.07
SP9P0CG40 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SP9P0CG40 AC005730.2-201ENST00000564549 1184 ntBASIC15.49■□□□□ 0.07
SP9P0CG40 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SP9P0CG40 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.49■□□□□ 0.07
SP9P0CG40 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SP9P0CG40 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms