Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.46■□□□□ 0.39
VTNP04004 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 AC092552.1-201ENST00000547243 906 ntBASIC17.46■□□□□ 0.39
VTNP04004 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 AC036164.1-201ENST00000570544 333 ntBASIC17.46■□□□□ 0.39
VTNP04004 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
VTNP04004 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.46■□□□□ 0.39
VTNP04004 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.46■□□□□ 0.39
VTNP04004 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
VTNP04004 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VTNP04004 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.46■□□□□ 0.38
VTNP04004 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
VTNP04004 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
VTNP04004 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VTNP04004 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VTNP04004 AL607033.1-201ENST00000623900 1599 ntBASIC17.45■□□□□ 0.38
VTNP04004 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 MIR648-201ENST00000385046 94 ntBASIC17.45■□□□□ 0.38
VTNP04004 AC136604.1-201ENST00000418535 575 ntBASIC17.45■□□□□ 0.38
VTNP04004 ARSEP1-201ENST00000420443 635 ntBASIC17.45■□□□□ 0.38
VTNP04004 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 TTTY23B-201ENST00000442790 549 ntBASIC17.45■□□□□ 0.38
VTNP04004 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VTNP04004 AC097359.3-201ENST00000603982 1210 ntBASIC17.45■□□□□ 0.38
VTNP04004 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.45■□□□□ 0.38
VTNP04004 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VTNP04004 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.45■□□□□ 0.38
VTNP04004 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VTNP04004 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 ATP5G2P4-201ENST00000442175 420 ntBASIC17.44■□□□□ 0.38
VTNP04004 GPR53P-205ENST00000457298 1084 ntBASIC17.44■□□□□ 0.38
VTNP04004 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.44■□□□□ 0.38
VTNP04004 SLED1-202ENST00000512051 380 ntBASIC17.44■□□□□ 0.38
VTNP04004 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.44■□□□□ 0.38
VTNP04004 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.44■□□□□ 0.38
VTNP04004 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
VTNP04004 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.44■□□□□ 0.38
VTNP04004 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 AL033527.5-201ENST00000641382 801 ntBASIC17.44■□□□□ 0.38
VTNP04004 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.44■□□□□ 0.38
VTNP04004 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
VTNP04004 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
VTNP04004 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms