Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.01■□□□□ 0.63
COL1A1P02452 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.01■□□□□ 0.63
COL1A1P02452 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
COL1A1P02452 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 AC112504.1-201ENST00000623415 1841 ntBASIC19.01■□□□□ 0.63
COL1A1P02452 SOCS2P1-201ENST00000417727 557 ntBASIC19.01■□□□□ 0.63
COL1A1P02452 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.01■□□□□ 0.63
COL1A1P02452 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 AC106760.1-201ENST00000508690 800 ntBASIC19.01■□□□□ 0.63
COL1A1P02452 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.01■□□□□ 0.63
COL1A1P02452 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.01■□□□□ 0.63
COL1A1P02452 AC068587.3-201ENST00000526613 355 ntBASIC19.01■□□□□ 0.63
COL1A1P02452 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.01■□□□□ 0.63
COL1A1P02452 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL1A1P02452 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.01■□□□□ 0.63
COL1A1P02452 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
COL1A1P02452 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COL1A1P02452 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL1A1P02452 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19■□□□□ 0.63
COL1A1P02452 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 CYP2T1P-202ENST00000641596 2535 ntBASIC19■□□□□ 0.63
COL1A1P02452 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19■□□□□ 0.63
COL1A1P02452 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 C1QBPP1-201ENST00000400117 770 ntBASIC19■□□□□ 0.63
COL1A1P02452 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19■□□□□ 0.63
COL1A1P02452 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19■□□□□ 0.63
COL1A1P02452 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19■□□□□ 0.63
COL1A1P02452 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19■□□□□ 0.63
COL1A1P02452 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19■□□□□ 0.63
COL1A1P02452 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19■□□□□ 0.63
COL1A1P02452 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19■□□□□ 0.63
COL1A1P02452 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19■□□□□ 0.63
COL1A1P02452 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19■□□□□ 0.63
COL1A1P02452 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL1A1P02452 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 PCDHB19P-201ENST00000570871 2371 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
COL1A1P02452 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 AC134915.1-201ENST00000426461 574 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 GNRHR2-203ENST00000581100 1187 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.99■□□□□ 0.63
COL1A1P02452 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.99■□□□□ 0.63
COL1A1P02452 AC084346.2-201ENST00000607097 949 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 AC093525.8-201ENST00000624099 1342 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 AC020907.1-201ENST00000616460 1350 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
COL1A1P02452 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 DRD5P1-201ENST00000456605 1438 ntBASIC18.99■□□□□ 0.63
COL1A1P02452 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COL1A1P02452 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL1A1P02452 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL1A1P02452 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL1A1P02452 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
COL1A1P02452 AC092933.1-201ENST00000393644 945 ntBASIC18.98■□□□□ 0.63
COL1A1P02452 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL1A1P02452 FAM21FP-201ENST00000426241 1131 ntBASIC18.98■□□□□ 0.63
COL1A1P02452 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.98■□□□□ 0.63
COL1A1P02452 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.98■□□□□ 0.63
COL1A1P02452 AC026410.3-201ENST00000514280 936 ntBASIC18.98■□□□□ 0.63
COL1A1P02452 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.98■□□□□ 0.63
COL1A1P02452 TDH-203ENST00000531764 1110 ntBASIC18.98■□□□□ 0.63
COL1A1P02452 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.98■□□□□ 0.63
COL1A1P02452 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.98■□□□□ 0.63
COL1A1P02452 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.98■□□□□ 0.63
COL1A1P02452 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
COL1A1P02452 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms