Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALDH1A1P00352 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ALDH1A1P00352 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 AC008267.1-201ENST00000474858 1069 ntBASIC18.02■□□□□ 0.48
ALDH1A1P00352 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALDH1A1P00352 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 MIR3907-201ENST00000579424 151 ntBASIC18.02■□□□□ 0.48
ALDH1A1P00352 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.02■□□□□ 0.48
ALDH1A1P00352 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.47
ALDH1A1P00352 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ALDH1A1P00352 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ALDH1A1P00352 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.02■□□□□ 0.47
ALDH1A1P00352 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.02■□□□□ 0.47
ALDH1A1P00352 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ALDH1A1P00352 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.02■□□□□ 0.47
ALDH1A1P00352 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 ACTBP8-201ENST00000403258 1108 ntBASIC18.01■□□□□ 0.47
ALDH1A1P00352 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 HNRNPA1P63-201ENST00000427917 963 ntBASIC18.01■□□□□ 0.47
ALDH1A1P00352 SPTLC1P5-201ENST00000450718 252 ntBASIC18.01■□□□□ 0.47
ALDH1A1P00352 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 GAPDHP40-201ENST00000505218 1006 ntBASIC18.01■□□□□ 0.47
ALDH1A1P00352 FTLP10-202ENST00000505798 471 ntBASIC18.01■□□□□ 0.47
ALDH1A1P00352 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALDH1A1P00352 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.01■□□□□ 0.47
ALDH1A1P00352 AL023775.1-201ENST00000454907 1746 ntBASIC18.01■□□□□ 0.47
ALDH1A1P00352 REXO1L1P-202ENST00000608646 1974 ntBASIC18■□□□□ 0.47
ALDH1A1P00352 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18■□□□□ 0.47
ALDH1A1P00352 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18■□□□□ 0.47
ALDH1A1P00352 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ALDH1A1P00352 AL138799.1-201ENST00000448213 1675 ntBASIC18■□□□□ 0.47
ALDH1A1P00352 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18■□□□□ 0.47
ALDH1A1P00352 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18■□□□□ 0.47
ALDH1A1P00352 AC134698.3-201ENST00000523880 214 ntBASIC18■□□□□ 0.47
ALDH1A1P00352 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18■□□□□ 0.47
ALDH1A1P00352 KLK11-210ENST00000600362 759 ntTSL 3 BASIC18■□□□□ 0.47
ALDH1A1P00352 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18■□□□□ 0.47
ALDH1A1P00352 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ALDH1A1P00352 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18■□□□□ 0.47
ALDH1A1P00352 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms