Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.77■□□□□ 0.92
LTN1O94822 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LTN1O94822 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.77■□□□□ 0.91
LTN1O94822 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LTN1O94822 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.77■□□□□ 0.91
LTN1O94822 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.77■□□□□ 0.91
LTN1O94822 EEF1DP1-201ENST00000585891 896 ntBASIC20.77■□□□□ 0.91
LTN1O94822 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
LTN1O94822 AP005019.2-201ENST00000615104 511 ntBASIC20.77■□□□□ 0.91
LTN1O94822 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LTN1O94822 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC20.76■□□□□ 0.91
LTN1O94822 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC20.76■□□□□ 0.91
LTN1O94822 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LTN1O94822 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.76■□□□□ 0.91
LTN1O94822 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.76■□□□□ 0.91
LTN1O94822 RPSAP36-202ENST00000494591 1261 ntBASIC20.76■□□□□ 0.91
LTN1O94822 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC20.76■□□□□ 0.91
LTN1O94822 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC20.76■□□□□ 0.91
LTN1O94822 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.76■□□□□ 0.91
LTN1O94822 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LTN1O94822 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC20.75■□□□□ 0.91
LTN1O94822 HOMER2P2-201ENST00000451621 847 ntBASIC20.75■□□□□ 0.91
LTN1O94822 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC20.75■□□□□ 0.91
LTN1O94822 RHOQP1-201ENST00000555758 579 ntBASIC20.75■□□□□ 0.91
LTN1O94822 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.75■□□□□ 0.91
LTN1O94822 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.75■□□□□ 0.91
LTN1O94822 BX539320.1-201ENST00000623759 877 ntBASIC20.75■□□□□ 0.91
LTN1O94822 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.75■□□□□ 0.91
LTN1O94822 AC092364.2-201ENST00000596710 2692 ntBASIC20.75■□□□□ 0.91
LTN1O94822 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.75■□□□□ 0.91
LTN1O94822 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.75■□□□□ 0.91
LTN1O94822 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
LTN1O94822 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.75■□□□□ 0.91
LTN1O94822 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.75■□□□□ 0.91
LTN1O94822 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LTN1O94822 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LTN1O94822 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LTN1O94822 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.75■□□□□ 0.91
LTN1O94822 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
LTN1O94822 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 POM121L8P-201ENST00000417732 1281 ntBASIC20.74■□□□□ 0.91
LTN1O94822 POM121L9P-203ENST00000441984 1285 ntBASIC20.74■□□□□ 0.91
LTN1O94822 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 AL591846.1-201ENST00000451736 433 ntBASIC20.74■□□□□ 0.91
LTN1O94822 KRT8P13-201ENST00000463294 1010 ntBASIC20.74■□□□□ 0.91
LTN1O94822 AC106820.3-201ENST00000561653 397 ntBASIC20.74■□□□□ 0.91
LTN1O94822 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LTN1O94822 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
LTN1O94822 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.74■□□□□ 0.91
LTN1O94822 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
LTN1O94822 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LTN1O94822 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LTN1O94822 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LTN1O94822 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms