Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTNND1O60716 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CTNND1O60716 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
CTNND1O60716 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNND1O60716 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNND1O60716 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CTNND1O60716 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.6■□□□□ 0.57
CTNND1O60716 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 HAUS4P1-201ENST00000406739 1145 ntBASIC18.6■□□□□ 0.57
CTNND1O60716 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CTNND1O60716 AL583810.1-201ENST00000553344 1045 ntBASIC18.6■□□□□ 0.57
CTNND1O60716 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.6■□□□□ 0.57
CTNND1O60716 AL450472.2-201ENST00000603663 1156 ntBASIC18.6■□□□□ 0.57
CTNND1O60716 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.6■□□□□ 0.57
CTNND1O60716 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CTNND1O60716 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
CTNND1O60716 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.6■□□□□ 0.57
CTNND1O60716 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CTNND1O60716 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CTNND1O60716 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNND1O60716 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 ME2P1-201ENST00000426028 1970 ntBASIC18.59■□□□□ 0.57
CTNND1O60716 REXO1L1P-202ENST00000608646 1974 ntBASIC18.59■□□□□ 0.57
CTNND1O60716 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CTNND1O60716 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNND1O60716 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CTNND1O60716 BCRP2-202ENST00000447763 634 ntBASIC18.59■□□□□ 0.57
CTNND1O60716 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
CTNND1O60716 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 BCRP6-201ENST00000510112 632 ntBASIC18.59■□□□□ 0.57
CTNND1O60716 BCRP7-201ENST00000511549 544 ntBASIC18.59■□□□□ 0.57
CTNND1O60716 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.59■□□□□ 0.57
CTNND1O60716 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.59■□□□□ 0.57
CTNND1O60716 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.59■□□□□ 0.57
CTNND1O60716 AC068587.3-201ENST00000526613 355 ntBASIC18.59■□□□□ 0.57
CTNND1O60716 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.59■□□□□ 0.57
CTNND1O60716 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.59■□□□□ 0.57
CTNND1O60716 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
CTNND1O60716 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CTNND1O60716 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CTNND1O60716 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.58■□□□□ 0.57
CTNND1O60716 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CTNND1O60716 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.58■□□□□ 0.57
CTNND1O60716 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CTNND1O60716 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.58■□□□□ 0.56
CTNND1O60716 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CTNND1O60716 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms