Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.33■□□□□ 0.05
GFRA3O60609 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.33■□□□□ 0.04
GFRA3O60609 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.33■□□□□ 0.04
GFRA3O60609 Z97985.1-201ENST00000332270 946 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.33■□□□□ 0.04
GFRA3O60609 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GFRA3O60609 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.33■□□□□ 0.04
GFRA3O60609 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.33■□□□□ 0.04
GFRA3O60609 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.33■□□□□ 0.04
GFRA3O60609 FAM86KP-201ENST00000509817 987 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 C2orf69P1-201ENST00000563532 1093 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 AL031713.1-201ENST00000564813 661 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 RN7SL48P-201ENST00000579283 293 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.33■□□□□ 0.04
GFRA3O60609 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.33■□□□□ 0.04
GFRA3O60609 AC000095.1-201ENST00000603208 874 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 AC103810.10-201ENST00000606504 343 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 YRDCP1-201ENST00000621419 643 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GFRA3O60609 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
GFRA3O60609 AC074138.1-201ENST00000611182 1303 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.33■□□□□ 0.04
GFRA3O60609 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 AC135050.7-201ENST00000624508 2218 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 KRT8P29-201ENST00000420409 1371 ntBASIC15.33■□□□□ 0.04
GFRA3O60609 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.33■□□□□ 0.04
GFRA3O60609 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
GFRA3O60609 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.32■□□□□ 0.04
GFRA3O60609 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
GFRA3O60609 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.32■□□□□ 0.04
GFRA3O60609 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 PDIA3P2-201ENST00000428073 158 ntBASIC15.32■□□□□ 0.04
GFRA3O60609 DDX39AP1-201ENST00000445147 1181 ntBASIC15.32■□□□□ 0.04
GFRA3O60609 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.32■□□□□ 0.04
GFRA3O60609 AC242376.1-201ENST00000559033 726 ntBASIC15.32■□□□□ 0.04
GFRA3O60609 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC15.32■□□□□ 0.04
GFRA3O60609 AL158211.2-201ENST00000607282 395 ntBASIC15.32■□□□□ 0.04
GFRA3O60609 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.32■□□□□ 0.04
GFRA3O60609 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.32■□□□□ 0.04
GFRA3O60609 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
GFRA3O60609 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GFRA3O60609 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
GFRA3O60609 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
GFRA3O60609 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.31■□□□□ 0.04
GFRA3O60609 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
GFRA3O60609 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.31■□□□□ 0.04
GFRA3O60609 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms