Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 GNAQP1-201ENST00000444815 1067 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 TERF1P3-201ENST00000505638 1227 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.36□□□□□ -0.11
ZIC3O60481 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.36□□□□□ -0.11
ZIC3O60481 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.36□□□□□ -0.11
ZIC3O60481 AC104794.3-201ENST00000566840 1248 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 AC092337.1-201ENST00000568699 1129 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 MIR4313-201ENST00000580760 101 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZIC3O60481 LINC01115-203ENST00000606068 577 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 LINC02084-201ENST00000606069 1096 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 AC004790.1-201ENST00000612686 536 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.36□□□□□ -0.11
ZIC3O60481 AF228730.6-201ENST00000641497 218 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 AC084121.3-201ENST00000641716 218 ntBASIC14.36□□□□□ -0.11
ZIC3O60481 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ZIC3O60481 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ZIC3O60481 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.36□□□□□ -0.11
ZIC3O60481 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZIC3O60481 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC3O60481 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC3O60481 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 RPL13P2-201ENST00000440687 659 ntBASIC14.35□□□□□ -0.11
ZIC3O60481 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC3O60481 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC3O60481 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.35□□□□□ -0.11
ZIC3O60481 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.35□□□□□ -0.11
ZIC3O60481 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.35□□□□□ -0.11
ZIC3O60481 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.35□□□□□ -0.11
ZIC3O60481 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ZIC3O60481 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ZIC3O60481 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.35□□□□□ -0.11
ZIC3O60481 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 AL607033.1-201ENST00000623900 1599 ntBASIC14.34□□□□□ -0.11
ZIC3O60481 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ZIC3O60481 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ZIC3O60481 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.34□□□□□ -0.11
ZIC3O60481 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ZIC3O60481 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms