Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL13O43927 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.33□□□□□ -0.12
CXCL13O43927 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 AC010336.2-201ENST00000564226 506 ntBASIC14.33□□□□□ -0.12
CXCL13O43927 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.33□□□□□ -0.12
CXCL13O43927 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.33□□□□□ -0.12
CXCL13O43927 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.33□□□□□ -0.12
CXCL13O43927 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCL13O43927 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CXCL13O43927 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCL13O43927 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 FO393414.2-201ENST00000405153 598 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 AZGP1P1-201ENST00000411909 902 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 HIST3H2BA-201ENST00000436555 524 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 AC092364.2-202ENST00000597012 1073 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
CXCL13O43927 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 AP003680.1-201ENST00000598970 3660 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCL13O43927 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 CDC14C-201ENST00000428251 1719 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 AC069224.1-201ENST00000566372 1715 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCL13O43927 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCL13O43927 DOC2GP-204ENST00000639052 2548 ntBASIC14.32□□□□□ -0.12
CXCL13O43927 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCL13O43927 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 REXO1L1P-202ENST00000608646 1974 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCL13O43927 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCL13O43927 MRPS18AP1-201ENST00000414458 589 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.31□□□□□ -0.12
CXCL13O43927 FAM8A3P-201ENST00000427218 844 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.31□□□□□ -0.12
CXCL13O43927 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.31□□□□□ -0.12
CXCL13O43927 EEF1DP4-201ENST00000446006 880 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 TSPY16P-201ENST00000449843 468 ntBASIC14.31□□□□□ -0.12
CXCL13O43927 AC009477.1-201ENST00000452936 217 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms