Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF13O43567 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.65□□□□□ -0.06
RNF13O43567 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RNF13O43567 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RNF13O43567 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 PMS2P7-201ENST00000506558 1336 ntBASIC14.65□□□□□ -0.06
RNF13O43567 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.65□□□□□ -0.06
RNF13O43567 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.65□□□□□ -0.06
RNF13O43567 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 AC023274.1-201ENST00000418278 595 ntBASIC14.64□□□□□ -0.07
RNF13O43567 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.64□□□□□ -0.07
RNF13O43567 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.64□□□□□ -0.07
RNF13O43567 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RNF13O43567 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF13O43567 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RNF13O43567 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RNF13O43567 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RNF13O43567 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 LINC02228-204ENST00000642115 2962 ntBASIC14.63□□□□□ -0.07
RNF13O43567 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.63□□□□□ -0.07
RNF13O43567 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RNF13O43567 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF13O43567 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.63□□□□□ -0.07
RNF13O43567 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.63□□□□□ -0.07
RNF13O43567 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RNF13O43567 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.63□□□□□ -0.07
RNF13O43567 RARRES2P8-201ENST00000566335 367 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms