Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A1O14983 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A1O14983 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP2A1O14983 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.25■□□□□ 0.51
ATP2A1O14983 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A1O14983 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
ATP2A1O14983 MIR6805-201ENST00000615055 62 ntBASIC18.25■□□□□ 0.51
ATP2A1O14983 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ATP2A1O14983 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A1O14983 AC022211.2-201ENST00000585075 2527 ntBASIC18.25■□□□□ 0.51
ATP2A1O14983 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
ATP2A1O14983 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.25■□□□□ 0.51
ATP2A1O14983 AGGF1P2-201ENST00000426656 2106 ntBASIC18.25■□□□□ 0.51
ATP2A1O14983 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP2A1O14983 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A1O14983 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.24■□□□□ 0.51
ATP2A1O14983 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP2A1O14983 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A1O14983 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP2A1O14983 AC022210.1-201ENST00000449856 793 ntBASIC18.24■□□□□ 0.51
ATP2A1O14983 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP2A1O14983 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.24■□□□□ 0.51
ATP2A1O14983 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 HNRNPUP1-201ENST00000554987 333 ntBASIC18.24■□□□□ 0.51
ATP2A1O14983 AC008735.3-201ENST00000596646 500 ntBASIC18.24■□□□□ 0.51
ATP2A1O14983 AL512343.1-201ENST00000605837 169 ntBASIC18.24■□□□□ 0.51
ATP2A1O14983 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A1O14983 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
ATP2A1O14983 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.24■□□□□ 0.51
ATP2A1O14983 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.24■□□□□ 0.51
ATP2A1O14983 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 REXO1L1P-202ENST00000608646 1974 ntBASIC18.24■□□□□ 0.51
ATP2A1O14983 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ATP2A1O14983 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 AC092171.3-201ENST00000610122 2651 ntBASIC18.23■□□□□ 0.51
ATP2A1O14983 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 AC134407.2-201ENST00000625089 1978 ntBASIC18.23■□□□□ 0.51
ATP2A1O14983 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A1O14983 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A1O14983 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A1O14983 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A1O14983 SLED1-202ENST00000512051 380 ntBASIC18.23■□□□□ 0.51
ATP2A1O14983 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.23■□□□□ 0.51
ATP2A1O14983 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.23■□□□□ 0.51
ATP2A1O14983 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.23■□□□□ 0.51
ATP2A1O14983 AL450472.2-201ENST00000603663 1156 ntBASIC18.23■□□□□ 0.51
ATP2A1O14983 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
ATP2A1O14983 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ATP2A1O14983 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.23■□□□□ 0.51
ATP2A1O14983 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms