Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.88□□□□□ -0.35
UPK2O00526 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
UPK2O00526 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.88□□□□□ -0.35
UPK2O00526 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.88□□□□□ -0.35
UPK2O00526 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 AC061975.2-201ENST00000581722 295 ntBASIC12.88□□□□□ -0.35
UPK2O00526 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 AC092865.6-201ENST00000642101 219 ntBASIC12.88□□□□□ -0.35
UPK2O00526 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.88□□□□□ -0.35
UPK2O00526 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
UPK2O00526 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UPK2O00526 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.88□□□□□ -0.35
UPK2O00526 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK2O00526 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK2O00526 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK2O00526 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
UPK2O00526 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK2O00526 AL591424.1-201ENST00000442569 1213 ntBASIC12.87□□□□□ -0.35
UPK2O00526 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK2O00526 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.87□□□□□ -0.35
UPK2O00526 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK2O00526 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK2O00526 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UPK2O00526 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.87□□□□□ -0.35
UPK2O00526 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.87□□□□□ -0.35
UPK2O00526 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 AC023157.3-201ENST00000619086 2088 ntBASIC12.87□□□□□ -0.35
UPK2O00526 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UPK2O00526 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.86□□□□□ -0.35
UPK2O00526 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK2O00526 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.86□□□□□ -0.35
UPK2O00526 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK2O00526 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
UPK2O00526 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK2O00526 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UPK2O00526 AC105250.1-201ENST00000509378 2057 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms