Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC073439.1-201ENST00000624121 1774 ntBASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 MTND6P24-201ENST00000440466 518 ntBASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 KRT17P7-201ENST00000451704 1104 ntBASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC009477.1-201ENST00000452936 217 ntBASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 BTBD7P1-201ENST00000447253 1453 ntBASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.78■□□□□ 0.12
TMX2-CTNND1H3BSU7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC006277.1-201ENST00000624348 1610 ntBASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 RNA5SP410-201ENST00000516285 106 ntBASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AP002490.2-201ENST00000524791 560 ntBASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC024267.1-201ENST00000582320 895 ntBASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 TEX28P1-201ENST00000613479 1221 ntBASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 TEX28P2-201ENST00000617764 1221 ntBASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMX2-CTNND1H3BSU7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMX2-CTNND1H3BSU7 LINC02012-201ENST00000608206 1725 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms