Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 YBX2P1-201ENST00000394192 760 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 TFAMP1-201ENST00000412727 736 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AL355306.1-201ENST00000415580 579 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 RN7SL589P-201ENST00000481268 310 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AL135744.1-201ENST00000565098 629 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 AC007950.2-201ENST00000615045 2347 ntBASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
TRGV1A0A0A0MS02 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AKAP8P1-201ENST00000434743 1349 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 HAUS4P1-201ENST00000406739 1145 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 SPDYE11-202ENST00000450699 704 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 SPDYE9P-201ENST00000570642 692 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 SPDYE10P-202ENST00000612005 668 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 SPDYE8P-202ENST00000612377 668 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AL589702.1-201ENST00000641229 1509 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 CDC14C-201ENST00000428251 1719 ntBASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC11.68□□□□□ -0.54
TRGV1A0A0A0MS02 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV1A0A0A0MS02 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms