Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AL589987.1-201ENST00000453380 819 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 RARRES2P5-201ENST00000564013 466 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 TMEM261P1-201ENST00000604899 340 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 Z97205.2-201ENST00000564697 1639 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AC092171.3-201ENST00000610122 2651 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 AL691432.1-201ENST00000596308 1422 ntBASIC15.68■□□□□ 0.1
CSNK1G3Q9Y6M4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 EEF1DP4-201ENST00000446006 880 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 ELK1P1-201ENST00000485699 580 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AC243562.2-201ENST00000561247 970 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AC132938.2-201ENST00000579188 680 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AL591163.1-201ENST00000641757 987 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 AL592424.1-201ENST00000563624 1536 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 HLA-A-202ENST00000376806 1854 ntBASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1G3Q9Y6M4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 IGHV3-71-201ENST00000523324 359 ntBASIC15.66■□□□□ 0.1
CSNK1G3Q9Y6M4 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms