Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPBQ9Y5S2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPBQ9Y5S2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC23.65■■□□□ 1.38
CDC42BPBQ9Y5S2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC23.65■■□□□ 1.38
CDC42BPBQ9Y5S2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPBQ9Y5S2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPBQ9Y5S2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 POM121L10P-201ENST00000436994 1285 ntBASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 NDUFV2P1-201ENST00000596415 907 ntBASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC23.64■■□□□ 1.38
CDC42BPBQ9Y5S2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 KRT8P14-201ENST00000414254 1442 ntBASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 AC011477.6-201ENST00000604980 1927 ntBASIC23.64■■□□□ 1.37
CDC42BPBQ9Y5S2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 AL354877.1-201ENST00000424412 413 ntBASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 AC091812.3-201ENST00000621362 345 ntBASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CDC42BPBQ9Y5S2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AGGF1P2-201ENST00000426656 2106 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 CD8B2-202ENST00000417670 633 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AC016700.1-201ENST00000429424 312 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 UPF3AP2-201ENST00000457924 1132 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 SERPINA13P-202ENST00000478994 924 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 RN7SL48P-201ENST00000579283 293 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AC104982.3-201ENST00000581995 514 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 RN7SL713P-201ENST00000582127 302 ntBASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPBQ9Y5S2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 PKD1P6-201ENST00000343738 4769 ntBASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 AL391280.1-201ENST00000506969 1062 ntBASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC23.61■■□□□ 1.37
CDC42BPBQ9Y5S2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms