Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 TSSK5P-201ENST00000423978 907 ntBASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 AC004890.2-204ENST00000481968 304 ntBASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL4A3BPQ9Y5P4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 RPL37AP1-201ENST00000412502 279 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AL079307.3-201ENST00000556114 283 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AC026979.3-201ENST00000607315 403 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 TEX28P1-201ENST00000613479 1221 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 TEX28P2-201ENST00000617764 1221 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AC112504.1-201ENST00000623415 1841 ntBASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.92■□□□□ 0.46
COL4A3BPQ9Y5P4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 AP001282.1-201ENST00000531301 1499 ntBASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.91■□□□□ 0.46
COL4A3BPQ9Y5P4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms