Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 IGHV3-22-201ENST00000520721 359 ntBASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 UNC93B6-202ENST00000528242 690 ntBASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 Z83851.2-201ENST00000609564 659 ntBASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.48■□□□□ 0.55
R3HCC1Q9Y3T6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 MRPL20P1-201ENST00000400819 433 ntBASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
R3HCC1Q9Y3T6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 CRYGEP-201ENST00000412192 528 ntBASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 IGHV3-65-201ENST00000523210 341 ntBASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 AC007292.2-201ENST00000593524 1812 ntBASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
R3HCC1Q9Y3T6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.46■□□□□ 0.54
R3HCC1Q9Y3T6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
R3HCC1Q9Y3T6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.45■□□□□ 0.54
R3HCC1Q9Y3T6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms