Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 RN7SL752P-201ENST00000463779 287 ntBASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 AC105020.1-201ENST00000435356 2205 ntBASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSX2IPQ9Y2D8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 LINC01144-201ENST00000626198 1710 ntBASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 PCDHA14-201ENST00000506751 2298 ntBASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 GIMAP3P-201ENST00000495150 836 ntBASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 SRD5A3P1-201ENST00000603021 949 ntBASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 SLC7A15P-201ENST00000424028 1363 ntBASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.25■□□□□ 0.35
SSX2IPQ9Y2D8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 U82695.1-201ENST00000635752 1889 ntBASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 DGCR5-201ENST00000399539 862 ntBASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 FO393414.2-201ENST00000405153 598 ntBASIC17.24■□□□□ 0.35
SSX2IPQ9Y2D8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms