Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AC016597.2-201ENST00000613256 341 ntBASIC15.28■□□□□ 0.04
LHX6Q9UPM6 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AC004461.2-201ENST00000629517 803 ntBASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 CLK3P2-201ENST00000427566 1453 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 RPL13AP20-201ENST00000459725 609 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 AC104596.2-201ENST00000512793 793 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 SDHAP3-202ENST00000515467 728 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 BANF1P1-201ENST00000553684 263 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 RN7SL48P-201ENST00000579283 293 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.27■□□□□ 0.04
LHX6Q9UPM6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.27■□□□□ 0.04
LHX6Q9UPM6 AC133963.1-201ENST00000504166 1679 ntBASIC15.27■□□□□ 0.03
LHX6Q9UPM6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 EGFEM1P-202ENST00000431685 1563 ntBASIC15.27■□□□□ 0.03
LHX6Q9UPM6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LHX6Q9UPM6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LHX6Q9UPM6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms