Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 AC136604.1-201ENST00000418535 575 ntBASIC17.22■□□□□ 0.35
NXF3Q9H4D5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NXF3Q9H4D5 CDC14C-201ENST00000428251 1719 ntBASIC17.21■□□□□ 0.35
NXF3Q9H4D5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 AC006449.5-201ENST00000610658 2098 ntBASIC17.21■□□□□ 0.35
NXF3Q9H4D5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 CLK3P2-201ENST00000427566 1453 ntBASIC17.21■□□□□ 0.35
NXF3Q9H4D5 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 GK-202ENST00000378941 458 ntTSL 3 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 AL512384.1-201ENST00000406683 331 ntBASIC17.21■□□□□ 0.35
NXF3Q9H4D5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 AC097359.3-201ENST00000603982 1210 ntBASIC17.21■□□□□ 0.35
NXF3Q9H4D5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NXF3Q9H4D5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NXF3Q9H4D5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.21■□□□□ 0.34
NXF3Q9H4D5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
NXF3Q9H4D5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.21■□□□□ 0.34
NXF3Q9H4D5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 AL607033.1-201ENST00000623900 1599 ntBASIC17.2■□□□□ 0.34
NXF3Q9H4D5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 SLED1-202ENST00000512051 380 ntBASIC17.2■□□□□ 0.34
NXF3Q9H4D5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 WFDC1-204ENST00000613603 549 ntBASIC17.2■□□□□ 0.34
NXF3Q9H4D5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.2■□□□□ 0.34
NXF3Q9H4D5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms