Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 HAUS4P1-201ENST00000406739 1145 ntBASIC16.19■□□□□ 0.18
VPS11Q9H270 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
VPS11Q9H270 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.19■□□□□ 0.18
VPS11Q9H270 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
VPS11Q9H270 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
VPS11Q9H270 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.19■□□□□ 0.18
VPS11Q9H270 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS11Q9H270 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.18■□□□□ 0.18
VPS11Q9H270 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
VPS11Q9H270 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.18■□□□□ 0.18
VPS11Q9H270 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
VPS11Q9H270 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
VPS11Q9H270 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.18■□□□□ 0.18
VPS11Q9H270 AL009178.2-201ENST00000597278 2719 ntBASIC16.18■□□□□ 0.18
VPS11Q9H270 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS11Q9H270 CICP13-201ENST00000422015 2789 ntBASIC16.17■□□□□ 0.18
VPS11Q9H270 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
VPS11Q9H270 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS11Q9H270 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS11Q9H270 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
VPS11Q9H270 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
VPS11Q9H270 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS11Q9H270 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.17■□□□□ 0.18
VPS11Q9H270 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.17■□□□□ 0.18
VPS11Q9H270 AC093724.1-201ENST00000448659 1027 ntBASIC16.17■□□□□ 0.18
VPS11Q9H270 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.17■□□□□ 0.18
VPS11Q9H270 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS11Q9H270 AP002469.2-201ENST00000531724 424 ntBASIC16.17■□□□□ 0.18
VPS11Q9H270 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.17■□□□□ 0.18
VPS11Q9H270 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 AC011477.6-201ENST00000604980 1927 ntBASIC16.17■□□□□ 0.18
VPS11Q9H270 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
VPS11Q9H270 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms