Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTPN18Q99952 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PTPN18Q99952 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 RPS2P36-201ENST00000456516 831 ntBASIC18.09■□□□□ 0.49
PTPN18Q99952 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN18Q99952 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN18Q99952 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC18.09■□□□□ 0.49
PTPN18Q99952 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PTPN18Q99952 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PTPN18Q99952 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PTPN18Q99952 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PTPN18Q99952 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN18Q99952 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PTPN18Q99952 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.08■□□□□ 0.49
PTPN18Q99952 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
PTPN18Q99952 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PTPN18Q99952 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.08■□□□□ 0.49
PTPN18Q99952 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PTPN18Q99952 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PTPN18Q99952 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTPN18Q99952 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN18Q99952 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN18Q99952 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN18Q99952 HSPB1P2-201ENST00000448722 546 ntBASIC18.08■□□□□ 0.48
PTPN18Q99952 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.08■□□□□ 0.48
PTPN18Q99952 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 NDUFV2P1-201ENST00000596415 907 ntBASIC18.08■□□□□ 0.48
PTPN18Q99952 AC128714.1-201ENST00000637035 887 ntBASIC18.08■□□□□ 0.48
PTPN18Q99952 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
PTPN18Q99952 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PTPN18Q99952 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PTPN18Q99952 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PTPN18Q99952 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PTPN18Q99952 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPN18Q99952 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN18Q99952 CYP46A4P-201ENST00000414953 267 ntBASIC18.07■□□□□ 0.48
PTPN18Q99952 AC016700.1-201ENST00000429424 312 ntBASIC18.07■□□□□ 0.48
PTPN18Q99952 POM121L10P-201ENST00000436994 1285 ntBASIC18.07■□□□□ 0.48
PTPN18Q99952 AC253536.4-201ENST00000440539 267 ntBASIC18.07■□□□□ 0.48
PTPN18Q99952 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 AC126915.1-201ENST00000522847 1038 ntBASIC18.07■□□□□ 0.48
PTPN18Q99952 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN18Q99952 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN18Q99952 ECM1P1-201ENST00000604092 1279 ntBASIC18.07■□□□□ 0.48
PTPN18Q99952 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN18Q99952 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms