Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ABCA3Q99758 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 AC104784.1-201ENST00000473096 294 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 AC100850.1-201ENST00000506768 649 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 MARK2P5-201ENST00000507649 634 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.78■□□□□ 0.92
ABCA3Q99758 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ABCA3Q99758 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
ABCA3Q99758 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.78■□□□□ 0.92
ABCA3Q99758 AC006480.2-201ENST00000609770 1337 ntBASIC20.78■□□□□ 0.92
ABCA3Q99758 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.77■□□□□ 0.92
ABCA3Q99758 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
ABCA3Q99758 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA3Q99758 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA3Q99758 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ABCA3Q99758 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ABCA3Q99758 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ABCA3Q99758 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA3Q99758 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ABCA3Q99758 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ABCA3Q99758 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ABCA3Q99758 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC20.77■□□□□ 0.92
ABCA3Q99758 AL136309.1-201ENST00000403917 691 ntBASIC20.77■□□□□ 0.92
ABCA3Q99758 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.77■□□□□ 0.92
ABCA3Q99758 AC106794.1-201ENST00000506935 792 ntBASIC20.77■□□□□ 0.92
ABCA3Q99758 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC20.77■□□□□ 0.92
ABCA3Q99758 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.77■□□□□ 0.92
ABCA3Q99758 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.77■□□□□ 0.92
ABCA3Q99758 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.77■□□□□ 0.91
ABCA3Q99758 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ABCA3Q99758 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.76■□□□□ 0.91
ABCA3Q99758 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 NPM1P43-201ENST00000558669 786 ntBASIC20.76■□□□□ 0.91
ABCA3Q99758 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC20.76■□□□□ 0.91
ABCA3Q99758 SYT17-208ENST00000568433 812 ntTSL 3 BASIC20.76■□□□□ 0.91
ABCA3Q99758 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ABCA3Q99758 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.76■□□□□ 0.91
ABCA3Q99758 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.76■□□□□ 0.91
ABCA3Q99758 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ABCA3Q99758 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.76■□□□□ 0.91
ABCA3Q99758 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ABCA3Q99758 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ABCA3Q99758 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ABCA3Q99758 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ABCA3Q99758 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC20.75■□□□□ 0.91
ABCA3Q99758 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC20.75■□□□□ 0.91
ABCA3Q99758 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.75■□□□□ 0.91
ABCA3Q99758 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.75■□□□□ 0.91
ABCA3Q99758 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA3Q99758 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ABCA3Q99758 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA3Q99758 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCA3Q99758 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA3Q99758 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
ABCA3Q99758 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCA3Q99758 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCA3Q99758 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.75■□□□□ 0.91
ABCA3Q99758 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
ABCA3Q99758 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
ABCA3Q99758 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA3Q99758 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.75■□□□□ 0.91
ABCA3Q99758 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ABCA3Q99758 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCA3Q99758 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ABCA3Q99758 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
ABCA3Q99758 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.74■□□□□ 0.91
ABCA3Q99758 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC20.74■□□□□ 0.91
ABCA3Q99758 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms