Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.35■□□□□ 0.69
CRAMP1Q96RY5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CRAMP1Q96RY5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CRAMP1Q96RY5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 FAM197Y7-201ENST00000432892 766 ntBASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 AC078819.1-201ENST00000547454 765 ntBASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 AC012085.1-201ENST00000548270 765 ntBASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CRAMP1Q96RY5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 AL138709.1-201ENST00000614840 1693 ntBASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CRAMP1Q96RY5 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 AC145423.3-201ENST00000615987 467 ntBASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CRAMP1Q96RY5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 KRT18P25-201ENST00000508931 1278 ntBASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 AL022328.3-201ENST00000607943 679 ntBASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CRAMP1Q96RY5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CRAMP1Q96RY5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms