Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 AL122018.1-201ENST00000446607 2310 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 AL591424.1-201ENST00000442569 1213 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 AC108751.1-201ENST00000490852 363 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 UNC93B6-202ENST00000528242 690 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 FAM197Y3-203ENST00000618346 717 ntBASIC14.69□□□□□ -0.06
SNX18Q96RF0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SNX18Q96RF0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
SNX18Q96RF0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 AC007967.2-201ENST00000432613 625 ntBASIC14.68□□□□□ -0.06
SNX18Q96RF0 KRT18P3-201ENST00000451602 1288 ntBASIC14.68□□□□□ -0.06
SNX18Q96RF0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 AC109635.5-201ENST00000533593 962 ntBASIC14.68□□□□□ -0.06
SNX18Q96RF0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 MIR4751-201ENST00000578027 74 ntBASIC14.68□□□□□ -0.06
SNX18Q96RF0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 AC005622.1-201ENST00000636801 1703 ntBASIC14.68□□□□□ -0.06
SNX18Q96RF0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.68□□□□□ -0.06
SNX18Q96RF0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SNX18Q96RF0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.67□□□□□ -0.06
SNX18Q96RF0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SNX18Q96RF0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 1215.8 ms