Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HPS1Q92902 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.81□□□□□ -0.04
HPS1Q92902 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 AL353593.2-201ENST00000602529 1483 ntBASIC14.81□□□□□ -0.04
HPS1Q92902 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.81□□□□□ -0.04
HPS1Q92902 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.81□□□□□ -0.04
HPS1Q92902 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.81□□□□□ -0.04
HPS1Q92902 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.81□□□□□ -0.04
HPS1Q92902 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HPS1Q92902 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
HPS1Q92902 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HPS1Q92902 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.8□□□□□ -0.04
HPS1Q92902 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HPS1Q92902 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HPS1Q92902 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.8□□□□□ -0.04
HPS1Q92902 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.8□□□□□ -0.04
HPS1Q92902 AL049840.3-201ENST00000602669 611 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 AC019129.2-201ENST00000609837 1235 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 AD001527.2-201ENST00000622994 785 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 AC073592.5-201ENST00000624854 528 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 PCDHA3-202ENST00000532566 4594 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HPS1Q92902 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 AL596087.1-201ENST00000400979 1969 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.8□□□□□ -0.04
HPS1Q92902 MYO15B-237ENST00000642007 4893 ntBASIC14.8□□□□□ -0.04
HPS1Q92902 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.8□□□□□ -0.04
HPS1Q92902 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HPS1Q92902 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.79□□□□□ -0.04
HPS1Q92902 PRAL-201ENST00000624952 3286 ntBASIC14.79□□□□□ -0.04
HPS1Q92902 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HPS1Q92902 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HPS1Q92902 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HPS1Q92902 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HPS1Q92902 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms