Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.59■□□□□ 0.73
RPGRQ92834 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.59■□□□□ 0.73
RPGRQ92834 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
RPGRQ92834 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RPGRQ92834 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.59■□□□□ 0.73
RPGRQ92834 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRQ92834 AC099548.2-209ENST00000480264 625 ntBASIC19.59■□□□□ 0.73
RPGRQ92834 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRQ92834 HNRNPUP1-201ENST00000554987 333 ntBASIC19.59■□□□□ 0.73
RPGRQ92834 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC19.59■□□□□ 0.73
RPGRQ92834 AC244669.2-201ENST00000612320 853 ntBASIC19.59■□□□□ 0.73
RPGRQ92834 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRQ92834 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RPGRQ92834 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRQ92834 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRQ92834 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRQ92834 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPGRQ92834 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RPGRQ92834 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPGRQ92834 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.58■□□□□ 0.73
RPGRQ92834 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RPGRQ92834 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC19.58■□□□□ 0.73
RPGRQ92834 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.58■□□□□ 0.73
RPGRQ92834 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RPGRQ92834 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RPGRQ92834 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPGRQ92834 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPGRQ92834 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC19.58■□□□□ 0.72
RPGRQ92834 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.58■□□□□ 0.72
RPGRQ92834 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.58■□□□□ 0.72
RPGRQ92834 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.58■□□□□ 0.72
RPGRQ92834 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.58■□□□□ 0.72
RPGRQ92834 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.58■□□□□ 0.72
RPGRQ92834 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPGRQ92834 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.58■□□□□ 0.72
RPGRQ92834 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.58■□□□□ 0.72
RPGRQ92834 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.58■□□□□ 0.72
RPGRQ92834 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC19.58■□□□□ 0.72
RPGRQ92834 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPGRQ92834 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.58■□□□□ 0.72
RPGRQ92834 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RPGRQ92834 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
RPGRQ92834 AC005052.1-201ENST00000625181 2492 ntBASIC19.58■□□□□ 0.72
RPGRQ92834 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPGRQ92834 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC19.58■□□□□ 0.72
RPGRQ92834 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPGRQ92834 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC19.57■□□□□ 0.72
RPGRQ92834 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RPGRQ92834 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.57■□□□□ 0.72
RPGRQ92834 KRT18P43-201ENST00000469825 1281 ntBASIC19.57■□□□□ 0.72
RPGRQ92834 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.57■□□□□ 0.72
RPGRQ92834 AC103810.3-201ENST00000583567 96 ntBASIC19.57■□□□□ 0.72
RPGRQ92834 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.57■□□□□ 0.72
RPGRQ92834 RHOXF1P1-202ENST00000635473 501 ntBASIC19.57■□□□□ 0.72
RPGRQ92834 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPGRQ92834 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.57■□□□□ 0.72
RPGRQ92834 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.57■□□□□ 0.72
RPGRQ92834 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RPGRQ92834 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.56■□□□□ 0.72
RPGRQ92834 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRQ92834 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms