Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC9Q92623 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC9Q92623 AL671710.1-201ENST00000610245 2349 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9Q92623 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 AC078925.2-201ENST00000624013 1973 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9Q92623 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TTC9Q92623 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9Q92623 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9Q92623 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9Q92623 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9Q92623 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9Q92623 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TTC9Q92623 KRT8P44-201ENST00000441609 1350 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 FAM220BP-201ENST00000377689 816 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.29■□□□□ 0.04
TTC9Q92623 ACTBP11-201ENST00000436287 1126 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC9Q92623 KRT18P34-201ENST00000488218 1270 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.29■□□□□ 0.04
TTC9Q92623 AL079307.3-201ENST00000556114 283 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9Q92623 AC105021.1-202ENST00000570572 669 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 GPR182-203ENST00000622922 591 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9Q92623 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC9Q92623 AC024909.3-201ENST00000611513 2257 ntBASIC15.29■□□□□ 0.04
TTC9Q92623 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC9Q92623 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.29■□□□□ 0.04
TTC9Q92623 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
TTC9Q92623 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TTC9Q92623 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC9Q92623 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC9Q92623 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 BNIP3P42-201ENST00000454982 569 ntBASIC15.28■□□□□ 0.04
TTC9Q92623 SPDYE18-201ENST00000510091 1050 ntBASIC15.28■□□□□ 0.04
TTC9Q92623 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9Q92623 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC9Q92623 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9Q92623 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9Q92623 BNIP3P29-201ENST00000598302 571 ntBASIC15.28■□□□□ 0.04
TTC9Q92623 TMEM261P1-201ENST00000604899 340 ntBASIC15.28■□□□□ 0.04
TTC9Q92623 AC011447.5-201ENST00000616168 564 ntBASIC15.28■□□□□ 0.04
TTC9Q92623 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC9Q92623 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 AL109936.8-201ENST00000641772 604 ntBASIC15.28■□□□□ 0.04
TTC9Q92623 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TTC9Q92623 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TTC9Q92623 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TTC9Q92623 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC9Q92623 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms