Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC000095.1-201ENST00000603208 874 ntBASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 MIR6787-201ENST00000616675 61 ntBASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.84■□□□□ 0.93
RAPGEF4Q8WZA2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 AC016694.1-201ENST00000434179 700 ntBASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 KRT18P43-201ENST00000469825 1281 ntBASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 AC097359.3-201ENST00000603982 1210 ntBASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RAPGEF4Q8WZA2 AL607033.1-201ENST00000623900 1599 ntBASIC20.83■□□□□ 0.92
RAPGEF4Q8WZA2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAPGEF4Q8WZA2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RAPGEF4Q8WZA2 KRT8P44-201ENST00000441609 1350 ntBASIC20.83■□□□□ 0.92
RAPGEF4Q8WZA2 AL121723.1-201ENST00000445194 1519 ntBASIC20.83■□□□□ 0.92
RAPGEF4Q8WZA2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RAPGEF4Q8WZA2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AC106760.1-201ENST00000508690 800 ntBASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAPGEF4Q8WZA2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AC092171.3-201ENST00000610122 2651 ntBASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAPGEF4Q8WZA2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms